Troubleshoot key programming

Question

I have a 2011 Ford Explorer I used the evo all with T harness install went great but I cannot setup the programming portion of the vehicle. I’ve tried the keys and the fobs that came along with it. I followed all 3 different setups lights do exactly as stated but the vehicle won’t start. I’ve noticed when I try to use the fobs the lights will light red on then yellow on but nothing will happen, thank you